Wilson disease (WD) is an autosomal-recessively inherited disorder of copper metabolism caused by
ATP7B gene mutations, resulting in impaired biliary copper excretion. Subsequent hepatic copper accumulation induces a heterogeneous phenotype that lacks a clear genotype correlation.
1Phenotype-genotype correlations in patients with Wilson's disease.
Although some individuals remain rather unaffected, others develop mild to moderate chronic liver disease or even acute liver failure.
2- Ferenci P.C.A.
- Stremmel W.
- Houwen R.
- Rosenberg W.
- Schilsky M.
- Jansen P.
- Moradpour D.
EASL clinical practice guidelines: Wilson's disease.
The mechanisms underlying this heterogeneity are currently unknown. Pharmacologic therapies in WD aim to restore copper homeostasis.
2- Ferenci P.C.A.
- Stremmel W.
- Houwen R.
- Rosenberg W.
- Schilsky M.
- Jansen P.
- Moradpour D.
EASL clinical practice guidelines: Wilson's disease.
In
Atp7b-/- rats, an animal model mirroring the WD liver phenotype,
3- Ahmed S.
- Deng J.
- Borjigin J.
A new strain of rat for functional analysis of PINA.
hepatic copper accumulation causes a reduced mitochondrial adenosine triphosphate (ATP) production capacity, mitochondrial destruction, liver failure, and animal death.
4- Zischka H.
- Lichtmannegger J.
- Schmitt S.
- Jagemann N.
- Schulz S.
- Wartini D.
- Jennen L.
- Rust C.
- Larochette N.
- Galluzzi L.
- Chajes V.
- Bandow N.
- Gilles V.S.
- DiSpirito A.A.
- Esposito I.
- Goettlicher M.
- Summer K.H.
- Kroemer G.
Liver mitochondrial membrane crosslinking and destruction in a rat model of Wilson disease.
, 5- Lichtmannegger J.
- Leitzinger C.
- Wimmer R.
- Schmitt S.
- Schulz S.
- Kabiri Y.
- Eberhagen C.
- Rieder T.
- Janik D.
- Neff F.
- Straub B.K.
- Schirmacher P.
- DiSpirito A.A.
- Bandow N.
- Baral B.S.
- Flatley A.
- Kremmer E.
- Denk G.
- Reiter F.P.
- Hohenester S.
- Eckardt-Schupp F.
- Dencher N.A.
- Adamski J.
- Sauer V.
- Niemietz C.
- Schmidt H.H.
- Merle U.
- Gotthardt D.N.
- Kroemer G.
- Weiss K.H.
- Zischka H.
Methanobactin reverses acute liver failure in a rat model of Wilson disease.
Heterozygous
Atp7b+/- rats do not accumulate copper and thus are highly stringent, nonaffected control animals.
3- Ahmed S.
- Deng J.
- Borjigin J.
A new strain of rat for functional analysis of PINA.
, 4- Zischka H.
- Lichtmannegger J.
- Schmitt S.
- Jagemann N.
- Schulz S.
- Wartini D.
- Jennen L.
- Rust C.
- Larochette N.
- Galluzzi L.
- Chajes V.
- Bandow N.
- Gilles V.S.
- DiSpirito A.A.
- Esposito I.
- Goettlicher M.
- Summer K.H.
- Kroemer G.
Liver mitochondrial membrane crosslinking and destruction in a rat model of Wilson disease.
Copper-induced mitochondrial damage in
Atp7b-/- rats can be resolved efficiently by innovative treatments using the potent copper chelating agent methanobactin (MB),
5- Lichtmannegger J.
- Leitzinger C.
- Wimmer R.
- Schmitt S.
- Schulz S.
- Kabiri Y.
- Eberhagen C.
- Rieder T.
- Janik D.
- Neff F.
- Straub B.K.
- Schirmacher P.
- DiSpirito A.A.
- Bandow N.
- Baral B.S.
- Flatley A.
- Kremmer E.
- Denk G.
- Reiter F.P.
- Hohenester S.
- Eckardt-Schupp F.
- Dencher N.A.
- Adamski J.
- Sauer V.
- Niemietz C.
- Schmidt H.H.
- Merle U.
- Gotthardt D.N.
- Kroemer G.
- Weiss K.H.
- Zischka H.
Methanobactin reverses acute liver failure in a rat model of Wilson disease.
which has an extraordinarily high copper affinity.
6- Choi D.W.
- Zea C.J.
- Do Y.S.
- Semrau J.D.
- Antholine W.E.
- Hargrove M.S.
- Pohl N.L.
- Boyd E.S.
- Geesey G.G.
- Hartsel S.C.
- Shafe P.H.
- McEllistrem M.T.
- Kisting C.J.
- Campbell D.
- Rao V.
- de la Mora A.M.
- Dispirito A.A.
Spectral, kinetic, and thermodynamic properties of Cu(I) and Cu(II) binding by methanobactin from Methylosinus trichosporium OB3b.
, 7- El Ghazouani A.
- Basle A.
- Firbank S.J.
- Knapp C.W.
- Gray J.
- Graham D.W.
- Dennison C.
Copper-binding properties and structures of methanobactins from Methylosinus trichosporium OB3b.
MB decreases mitochondrial copper within days, coinciding with liver tissue restoration and avoidance of liver failure and animal death.
5- Lichtmannegger J.
- Leitzinger C.
- Wimmer R.
- Schmitt S.
- Schulz S.
- Kabiri Y.
- Eberhagen C.
- Rieder T.
- Janik D.
- Neff F.
- Straub B.K.
- Schirmacher P.
- DiSpirito A.A.
- Bandow N.
- Baral B.S.
- Flatley A.
- Kremmer E.
- Denk G.
- Reiter F.P.
- Hohenester S.
- Eckardt-Schupp F.
- Dencher N.A.
- Adamski J.
- Sauer V.
- Niemietz C.
- Schmidt H.H.
- Merle U.
- Gotthardt D.N.
- Kroemer G.
- Weiss K.H.
- Zischka H.
Methanobactin reverses acute liver failure in a rat model of Wilson disease.
Discussion
These findings show that hepatic mitochondria are exceptionally susceptible to liver copper overload, thereby being a key organelle in WD pathogenesis. However, mitochondria also readily respond to environmental changes other than increased copper by metabolic adaptations and can balance imposed challenges to different extents for a long time.
13- Einer C.
- Hohenester S.
- Wimmer R.
- Wottke L.
- Artmann R.
- Schulz S.
- Gosmann C.
- Simmons A.
- Leitzinger C.
- Eberhagen C.
- Borchard S.
- Schmitt S.
- Hauck S.M.
- von Toerne C.
- Jastroch M.
- Walheim E.
- Rust C.
- Gerbes A.L.
- Popper B.
- Mayr D.
- Schnurr M.
- Vollmar A.M.
- Denk G.
- Zischka H.
Mitochondrial adaptation in steatotic mice.
, 33- Koliaki C.
- Szendroedi J.
- Kaul K.
- Jelenik T.
- Nowotny P.
- Jankowiak F.
- Herder C.
- Carstensen M.
- Krausch M.
- Knoefel W.T.
- Schlensak M.
- Roden M.
Adaptation of hepatic mitochondrial function in humans with non-alcoholic fatty liver is lost in steatohepatitis.
We reasoned that this mitochondrial flexibility might contribute to the high variability of the clinical presentation of WD.
1Phenotype-genotype correlations in patients with Wilson's disease.
The
ATP7B genotype is not clearly predictive for the age of onset, the disease presentation or progression, or for the response to treatment.
1Phenotype-genotype correlations in patients with Wilson's disease.
, 34- Bandmann O.
- Weiss K.H.
- Kaler S.G.
Wilson's disease and other neurological copper disorders.
This absence of a genotype–phenotype correlation may be best exemplified by studies on genetically identical WD twins, whose clinical appearance ranged from presymptomatic phenotypes to liver failure.
17- Kegley K.M.
- Sellers M.A.
- Ferber M.J.
- Johnson M.W.
- Joelson D.W.
- Shrestha R.
Fulminant Wilson's disease requiring liver transplantation in one monozygotic twin despite identical genetic mutation.
, 35- Czlonkowska A.
- Gromadzka G.
- Chabik G.
Monozygotic female twins discordant for phenotype of Wilson's disease.
Consequently, it has been suggested that the WD phenotype may be highly attributable to environmental factors.
35- Czlonkowska A.
- Gromadzka G.
- Chabik G.
Monozygotic female twins discordant for phenotype of Wilson's disease.
, 36Genetic and environmental modifiers of Wilson disease.
Steatosis is a frequently observed early characteristic in livers of WD patients,
8Mitochondrial and fatty changes in hepatocytes of patients with Wilson's disease.
, 9- Stattermayer A.F.
- Traussnigg S.
- Dienes H.P.
- Aigner E.
- Stauber R.
- Lackner K.
- Hofer H.
- Stift J.
- Wrba F.
- Stadlmayr A.
- Datz C.
- Strasser M.
- Maieron A.
- Trauner M.
- Ferenci P.
Hepatic steatosis in Wilson disease--role of copper and PNPLA3 mutations.
and mutations in the ε3 and ε4 isoforms of the apolipoprotein E gene are associated with WD onset.
37- Schiefermeier M.
- Kollegger H.
- Madl C.
- Polli C.
- Oder W.
- Kuhn H.
- Berr F.
- Ferenci P.
The impact of apolipoprotein E genotypes on age at onset of symptoms and phenotypic expression in Wilson's disease.
, 38- Litwin T.
- Gromadzka G.
- Czlonkowska A.
Apolipoprotein E gene (APOE) genotype in Wilson's disease: impact on clinical presentation.
Moreover, mutations in the lipase gene
PNALP3 are linked to the percentage of liver steatosis in patients with WD.
9- Stattermayer A.F.
- Traussnigg S.
- Dienes H.P.
- Aigner E.
- Stauber R.
- Lackner K.
- Hofer H.
- Stift J.
- Wrba F.
- Stadlmayr A.
- Datz C.
- Strasser M.
- Maieron A.
- Trauner M.
- Ferenci P.
Hepatic steatosis in Wilson disease--role of copper and PNPLA3 mutations.
Furthermore, lower serum cholesterol levels were observed in WD patients with hepatic symptoms,
39- Rodo M.
- Czonkowska A.
- Pulawska M.
- Swiderska M.
- Tarnacka B.
- Wehr H.
The level of serum lipids, vitamin E and low density lipoprotein oxidation in Wilson's disease patients.
, 40- Seessle J.
- Gohdes A.
- Gotthardt D.N.
- Pfeiffenberger J.
- Eckert N.
- Stremmel W.
- Reuner U.
- Weiss K.H.
Alterations of lipid metabolism in Wilson disease.
and WD animal models, such as
Atp7b-/- mice, present a down-regulation of enzymes involved in cholesterol and lipid metabolism,
22- Huster D.
- Purnat T.D.
- Burkhead J.L.
- Ralle M.
- Fiehn O.
- Stuckert F.
- Olson N.E.
- Teupser D.
- Lutsenko S.
High copper selectively alters lipid metabolism and cell cycle machinery in the mouse model of Wilson disease.
, 41- Ralle M.
- Huster D.
- Vogt S.
- Schirrmeister W.
- Burkhead J.L.
- Capps T.R.
- Gray L.
- Lai B.
- Maryon E.
- Lutsenko S.
Wilson disease at a single cell level: intracellular copper trafficking activates compartment-specific responses in hepatocytes.
whereas Long-Evans Cinnamon rats show lower serum but higher liver cholesterol and triglyceride levels.
21- Levy E.
- Brunet S.
- Alvarez F.
- Seidman E.
- Bouchard G.
- Escobar E.
- Martin S.
Abnormal hepatobiliary and circulating lipid metabolism in the Long-Evans Cinnamon rat model of Wilson's disease.
These studies clearly indicate a link between the lipid/cholesterol metabolism and WD pathophysiology. We therefore asked whether a steatosis-promoting diet would influence WD-related liver damage, and especially mitochondrial damage, in
Atp7b-/- rats. The rationale was that both enriched copper and fatty acids cause bioenergetic defects and therefore synergistically and detrimentally may coincide on hepatic mitochondria.
An HCD caused strongly increased and accelerated liver damage, evidenced by serum markers of liver damage (
Figure 2A and
B) and histologic assessment (HAI score and NAS). In HCD- vs ND-fed
Atp7b-/- rats, a drastically increased copper load was found in mitochondria, but equal cytosolic or overall hepatic copper contents. Compared with mitochondria from either HCD- or ND-fed control rats or from ND-fed
Atp7b-/- rats, mitochondria from HCD-fed
Atp7b-/- rats appeared to have the most severe mitochondrial structural alterations, a significantly lower ATP production, and a significantly enhanced mitochondrial ROS emergence. Hence, the combination of an HCD with an increasing copper load caused severe structural and functional mitochondrial impairments, whereas mitochondrial copper overload strongly correlated with progressive liver damage (
Figure 2,
Figure 3,
Figure 4,
Figure 5).
Thus, a simple change in nutrition from a normal diet to an HCD severely aggravated and accelerated WD pathophysiology in HCD-fed
Atp7b-/- rats. This could be the result of 2 not mutually exclusive reasons: enhanced copper uptake and/or an additional metabolic burden imposed on the hepatocytes and their mitochondria because the later organelles are both the prime site for cellular copper utilization (via complex IV of the respiratory chain) and for fatty acid degradation. Based on reports that ND-fed control animals consumed similar amounts of food and water as their HCD-fed counterparts,
24- Tetri L.H.
- Basaranoglu M.
- Brunt E.M.
- Yerian L.M.
- Neuschwander-Tetri B.A.
Severe NAFLD with hepatic necroinflammatory changes in mice fed trans fats and a high-fructose corn syrup equivalent.
we adjusted for an equal copper supply by the 2 diets (see the
Materials and Methods section). In subsequent testing, however, we found that the rats consumed less HCD than ND food, but more fructose water instead of water, respectively. Upon recalculating the supplied copper amounts, we found that the HCD/syrup diet provided approximately 18% more copper. Interestingly, this slightly increased copper supply, however, did not result in correspondingly increased liver copper levels (
Figure 3) because we observed equal copper loads in total liver homogenates and in liver cytosol. To the contrary, mitochondria from HCD- vs ND-fed control animals had drastically and significantly increased copper levels (
Figure 3). This may indicate that the distribution of hepatocyte copper changes upon HCD feeding. In the HCD-fed
Atp7b-/- rat liver mitochondria this copper overload caused severe structural and functional mitochondrial deficits (
Figures 4 and
5), paralleled by cell death (
Figure 2). We recently reported that progressive mitochondrial copper accumulation causes a steady reduction of their capacity to produce ATP.
5- Lichtmannegger J.
- Leitzinger C.
- Wimmer R.
- Schmitt S.
- Schulz S.
- Kabiri Y.
- Eberhagen C.
- Rieder T.
- Janik D.
- Neff F.
- Straub B.K.
- Schirmacher P.
- DiSpirito A.A.
- Bandow N.
- Baral B.S.
- Flatley A.
- Kremmer E.
- Denk G.
- Reiter F.P.
- Hohenester S.
- Eckardt-Schupp F.
- Dencher N.A.
- Adamski J.
- Sauer V.
- Niemietz C.
- Schmidt H.H.
- Merle U.
- Gotthardt D.N.
- Kroemer G.
- Weiss K.H.
- Zischka H.
Methanobactin reverses acute liver failure in a rat model of Wilson disease.
This is owing to the direct impact of copper on the protein complexes involved in ATP production, but also ATP delivery to the cytosol.
4- Zischka H.
- Lichtmannegger J.
- Schmitt S.
- Jagemann N.
- Schulz S.
- Wartini D.
- Jennen L.
- Rust C.
- Larochette N.
- Galluzzi L.
- Chajes V.
- Bandow N.
- Gilles V.S.
- DiSpirito A.A.
- Esposito I.
- Goettlicher M.
- Summer K.H.
- Kroemer G.
Liver mitochondrial membrane crosslinking and destruction in a rat model of Wilson disease.
This bioenergetic deficit matches the clinical presentation of liver damage in
Atp7b-/- rats. A decrease in the ATP production capacity to 70% in comparison with mitochondria from
Atp7b+/- control rats was found to be critical for the onset of clinically apparent liver damage (ie, AST levels > 200 U/L).
5- Lichtmannegger J.
- Leitzinger C.
- Wimmer R.
- Schmitt S.
- Schulz S.
- Kabiri Y.
- Eberhagen C.
- Rieder T.
- Janik D.
- Neff F.
- Straub B.K.
- Schirmacher P.
- DiSpirito A.A.
- Bandow N.
- Baral B.S.
- Flatley A.
- Kremmer E.
- Denk G.
- Reiter F.P.
- Hohenester S.
- Eckardt-Schupp F.
- Dencher N.A.
- Adamski J.
- Sauer V.
- Niemietz C.
- Schmidt H.H.
- Merle U.
- Gotthardt D.N.
- Kroemer G.
- Weiss K.H.
- Zischka H.
Methanobactin reverses acute liver failure in a rat model of Wilson disease.
In the present study, a mitochondrial ATP production capacity of 80% was preserved in young ND-fed
Atp7b-/- rats (
Figure 5A). In agreement with our earlier study, these rats still were healthy (
Figure 2). In a mouse study, we reported that the increased supply of fatty acids via an HCD causes lipidomic alterations in the membranes of liver mitochondria that also reduce their ATP production capacity,
13- Einer C.
- Hohenester S.
- Wimmer R.
- Wottke L.
- Artmann R.
- Schulz S.
- Gosmann C.
- Simmons A.
- Leitzinger C.
- Eberhagen C.
- Borchard S.
- Schmitt S.
- Hauck S.M.
- von Toerne C.
- Jastroch M.
- Walheim E.
- Rust C.
- Gerbes A.L.
- Popper B.
- Mayr D.
- Schnurr M.
- Vollmar A.M.
- Denk G.
- Zischka H.
Mitochondrial adaptation in steatotic mice.
along with only mild signs of liver impairment.
13- Einer C.
- Hohenester S.
- Wimmer R.
- Wottke L.
- Artmann R.
- Schulz S.
- Gosmann C.
- Simmons A.
- Leitzinger C.
- Eberhagen C.
- Borchard S.
- Schmitt S.
- Hauck S.M.
- von Toerne C.
- Jastroch M.
- Walheim E.
- Rust C.
- Gerbes A.L.
- Popper B.
- Mayr D.
- Schnurr M.
- Vollmar A.M.
- Denk G.
- Zischka H.
Mitochondrial adaptation in steatotic mice.
In agreement with this study, we determined a reduced mitochondrial ATP production capacity but comparatively mild signs of apparent liver damage in HCD-fed
Atp7b+/- control vs
Atp7b-/- rats (steatohepatitis was present in only 2 of 6 HCD-fed
Atp7b+/- rats) (
Figures 1C, 2, and 5
A,
Tables 1 and
3). This situation changed when an increasing copper load coincided with steatosis: a decreased ATP production capacity to less than 40% was paralleled by severe structural impairments and strongly increased ROS emergence in mitochondria from HCD-fed
Atp7b-/- rats, in comparison with mitochondria from all other rats, whether HCD- or ND-fed controls or ND-fed
Atp7b-/- rats (
Figures 4 and
5). One interesting question for future experiments is why mitochondrial turnover and renewal via mitophagy was incapable to rescue the detrimental effects of copper and steatosis coinciding on mitochondria. Either such pathways were efficiently inactivated (possibly involving activated mechanistic target of rapamycin (mTOR) pathways), blocked by copper excess, negatively affected by bioenergetic deficits that were too strong, or simply overwhelmed. As a result, however, such mitochondrial damage strongly challenges hepatocytes, and cell death (both necrosis and apoptosis) was extensive (
Figure 2D), paralleled by severe liver damage in HCD-fed
Atp7b-/- rats (
Figure 2,
Table 1,
Table 2,
Table 3). We therefore conclude that WD pathophysiology in HCD-fed
Atp7b-/- rats is aggravated because of a highly detrimental combination of massive copper- and fatty acid–induced impacts on liver mitochondria.
Further support for the decisive role of mitochondrial damage in the pathophysiology of HCD-fed
Atp7b-/- rats comes from the results of the applied short-term treatment with the copper chelator MB (
Figures 7 and
8). We chose this drug, and applied it once daily for 5 consecutive days, to test for a fast mitochondrial recovery in HCD-fed
Atp7b-/- rats, as a potential remedy against acute and overt liver damage. In comparison with our earlier reports, such treatments are relatively mild because we also had applied MB 2 or 3 times daily or for increased time periods of up to 1 month.
4- Zischka H.
- Lichtmannegger J.
- Schmitt S.
- Jagemann N.
- Schulz S.
- Wartini D.
- Jennen L.
- Rust C.
- Larochette N.
- Galluzzi L.
- Chajes V.
- Bandow N.
- Gilles V.S.
- DiSpirito A.A.
- Esposito I.
- Goettlicher M.
- Summer K.H.
- Kroemer G.
Liver mitochondrial membrane crosslinking and destruction in a rat model of Wilson disease.
, 5- Lichtmannegger J.
- Leitzinger C.
- Wimmer R.
- Schmitt S.
- Schulz S.
- Kabiri Y.
- Eberhagen C.
- Rieder T.
- Janik D.
- Neff F.
- Straub B.K.
- Schirmacher P.
- DiSpirito A.A.
- Bandow N.
- Baral B.S.
- Flatley A.
- Kremmer E.
- Denk G.
- Reiter F.P.
- Hohenester S.
- Eckardt-Schupp F.
- Dencher N.A.
- Adamski J.
- Sauer V.
- Niemietz C.
- Schmidt H.H.
- Merle U.
- Gotthardt D.N.
- Kroemer G.
- Weiss K.H.
- Zischka H.
Methanobactin reverses acute liver failure in a rat model of Wilson disease.
Nevertheless, this short-term MB treatment significantly reduced mitochondrial structural damage and improved mitochondrial ATP production with a concomitant decrease in ROS emergence (
Figure 7). This mitochondrial amelioration was paralleled by a rescue of overt/acute liver damage in all treated animals, as serum AST levels decreased, bilirubin levels were below detection and animals regained body weight (
Table 8). In addition, compared with untreated HCD-fed
Atp7b-/- rats, serum copper and bile salt levels, plausibly increased upon hepatocyte disintegration, significantly decreased in MB-treated HCD-fed
Atp7b-/- rats (
Figure 8B and
C).
Despite this highly beneficial effect of the applied short-term MB-treatment, mitochondrial and liver rescue was not complete. Although the mitochondrial copper content decreased to 50% (
Figure 7D), in absolute terms, the remaining copper load still was a borderline burden (
Table 8) and comparable with the values of ND-fed
Atp7b-/- rats (
Figure 3E) that were about to develop hepatitis within days (
Figure 2B). This borderline status may explain the noticeable but limited improvements in liver histology (
Figure 8), and it remains for future studies to test whether prolonged/intensified MB treatments would result in a more complete reversal of mitochondrial and liver damage in HCD-fed
Atp7b-/- rats.
HCD feeding caused steatosis in all HCD-fed animals. In contrast, steatohepatitis was present in only 2 of 6 HCD-fed
Atp7b+/- rats, but in all 6 HCD-fed
Atp7b-/- rats (
Figure 1,
Table 1). Accordingly, tendentious lower levels of visceral fat (
Figure 1A) and lower levels of liver triglycerides (
Figure 1B) were found in HCD-fed
Atp7b-/- vs
Atp7b+/- rats, indicating a comparatively higher energy turnover in
Atp7b-/- livers. Indeed, mitochondrial enzymes involved in fatty acid degradation were enriched in livers of HCD-fed
Atp7b+/- rats, but especially in HCD-fed
Atp7b-/- rat livers (
Table 4). Interestingly, we also observed higher abundancies of lipid biosynthesis enzymes, partly in HCD-fed
Atp7b+/- control rats, but very prominently in HCD-fed
Atp7b-/- rats (
Table 5). Although these increased enzyme abundancies do not necessarily mean an enhanced flux via these pathways, the highly increased supply of fatty acids via the HCD vs ND
14- Einer C.
- Hohenester S.
- Wimmer R.
- Wottke L.
- Artmann R.
- Schulz S.
- Gosmann C.
- Simmons A.
- Leitzinger C.
- Eberhagen C.
- Borchard S.
- Schmitt S.
- Hauck S.M.
- von Toerne C.
- Jastroch M.
- Walheim E.
- Rust C.
- Gerbes A.L.
- Popper B.
- Mayr D.
- Schnurr M.
- Vollmar A.M.
- Denk G.
- Zischka H.
Data on chow, liver tissue and mitochondrial fatty acid compositions as well as mitochondrial proteome changes after feeding mice a western diet for 6-24 weeks.
indicates a 2-fold adaptation in hepatocytes: first, their increased degradation in mitochondria via ß-oxidation, and, second, their esterification to triglycerides that are preferentially stored in cytosol. Future measurements have to validate such enhanced metabolic fluxes and/or specific metabolites from these pathways. Furthermore, besides the mere levels of enzyme abundancies, metabolic enzyme activities may be modulated further via post-translational modifications such as acetylation and succinylation,
42- Newman J.C.
- He W.
- Verdin E.
Mitochondrial protein acylation and intermediary metabolism: regulation by sirtuins and implications for metabolic disease.
which were not assessed in this study. Indeed, increased acetyl-CoA levels from augmented ß-oxidation may result in increased acetylation
43- Menzies K.J.
- Zhang H.
- Katsyuba E.
- Auwerx J.
Protein acetylation in metabolism - metabolites and cofactors.
of mitochondrial enzymes involved in the tricarboxylic acid cycle, fatty acid oxidation, amino acid and carbohydrate metabolism, ketone body synthesis, and the urea cycle.
42- Newman J.C.
- He W.
- Verdin E.
Mitochondrial protein acylation and intermediary metabolism: regulation by sirtuins and implications for metabolic disease.
, 44- Hirschey M.D.
- Shimazu T.
- Jing E.
- Grueter C.A.
- Collins A.M.
- Aouizerat B.
- Stancakova A.
- Goetzman E.
- Lam M.M.
- Schwer B.
- Stevens R.D.
- Muehlbauer M.J.
- Kakar S.
- Bass N.M.
- Kuusisto J.
- Laakso M.
- Alt F.W.
- Newgard C.B.
- Farese Jr., R.V.
- Kahn C.R.
- Verdin E.
SIRT3 deficiency and mitochondrial protein hyperacetylation accelerate the development of the metabolic syndrome.
Moreover, an increasing acetyl-CoA amount would influence not only these pathways, but also possibly would cause increased cholesterol levels because acetyl-CoA is the precursor in hepatic cholesterol biosynthesis.
32Ketogenesis and cholesterol synthesis in normal and neoplastic tissues of the rat.
Such hepatic cholesterol accumulation has been reported in NAFLD patients and rodents
45- Arguello G.
- Balboa E.
- Arrese M.
- Zanlungo S.
Recent insights on the role of cholesterol in non-alcoholic fatty liver disease.
and correlated with histologic severity of the disease and thus seems to be associated with HCD malnutrition. In fact, increased enzyme abundancies for nearly the whole cholesterol biosynthesis pathway were found in HCD-fed
Atp7b-/- rat livers (
Table 6). Unexpectedly, however, we did not observe specifically increased cholesterol levels in these animals (
Figure 6C). This may have been prevented by an increased routing of cholesterol into bile salts because we determined 2- to 11-fold increases in abundancies of enzymes involved in bile salt synthesis and bile excretion in HCD-fed
Atp7b-/- rat livers (
Table 7). In agreement, we found increased serum bile salts only in serum of HCD-fed
Atp7b-/- rats (
Figure 6D), which were reduced significantly upon MB treatment (
Figure 8C). Clearly, such increased bile salt synthesis may be a further detrimental impact in HCD-fed
Atp7b-/- rat livers because accumulating bile salts are hepatotoxic (especially to hepatic mitochondria).
46- Schulz S.
- Schmitt S.
- Wimmer R.
- Aichler M.
- Eisenhofer S.
- Lichtmannegger J.
- Eberhagen C.
- Artmann R.
- Tookos F.
- Walch A.
- Krappmann D.
- Brenner C.
- Rust C.
- Zischka H.
Progressive stages of mitochondrial destruction caused by cell toxic bile salts.
, 47- Hohenester S.
- Gates A.
- Wimmer R.
- Beuers U.
- Anwer M.S.
- Rust C.
- Webster C.R.L.
Phosphatidylinositol-3-kinase p110γ contributes to bile salt-induced apoptosis in primary rat hepatocytes and human hepatoma cells.
In conclusion, the combination of accumulating copper with an HCD is highly detrimental to hepatic mitochondria. A toxic triad of ATP depletion, massively increased ROS, and bile salts seals the fate of affected hepatocytes. This indicates that a high- vs normal-calorie nutrition may have a tremendous impact on WD progression and severity and may contribute to the striking phenotype–genotype discrepancies encountered in WD patients, in agreement with a recent review article that indicated the importance of lifestyle modifications in WD.
18Wilson disease: at the crossroads between genetics and epigenetics-a review of the evidence.
We therefore suggest monitoring such aspects of nutrition in much more detail in the future, to establish whether dietary counseling of WD patients may be of therapeutic benefit.
Materials and Methods
Animal Studies
Animals were maintained under the Guidelines for the Care and Use of Laboratory Animals of the Helmholtz Center Munich. Animal experiments were approved by the government authorities of the Regierung von Oberbayern, Munich, Germany.
Control
Atp7b+/- and WD
Atp7b-/- rats of both sexes (
Table 2; strain name, LPP crossbreed between Long Evans cinnamon rats and Piebald Virol Glaxo rats; bred in-house, provided by Borjigin) were used because we currently have no indication for a sex-dependent altered WD phenotype in these animals.
3- Ahmed S.
- Deng J.
- Borjigin J.
A new strain of rat for functional analysis of PINA.
Animals were fed ad libitum either on an ND (1314; Altromin Spezialfutter GmbH, Seelenkamp, Germany; copper content, 13.9 mg/kg; metabolic energy, 3301 kcal/kg; 14% kcal from fat) and tap water (copper content, <0.2 mg/L) or on an HCD (Altromin Spezialfutter GmbH; copper content, 9.3 mg/kg; metabolic energy, 4523 kcal/kg; 45% kcal from fat) and fructose syrup (metabolic energy, 722 kcal/L) in drinking water supplemented with 3.1 mg/L copper.
14- Einer C.
- Hohenester S.
- Wimmer R.
- Wottke L.
- Artmann R.
- Schulz S.
- Gosmann C.
- Simmons A.
- Leitzinger C.
- Eberhagen C.
- Borchard S.
- Schmitt S.
- Hauck S.M.
- von Toerne C.
- Jastroch M.
- Walheim E.
- Rust C.
- Gerbes A.L.
- Popper B.
- Mayr D.
- Schnurr M.
- Vollmar A.M.
- Denk G.
- Zischka H.
Data on chow, liver tissue and mitochondrial fatty acid compositions as well as mitochondrial proteome changes after feeding mice a western diet for 6-24 weeks.
, 24- Tetri L.H.
- Basaranoglu M.
- Brunt E.M.
- Yerian L.M.
- Neuschwander-Tetri B.A.
Severe NAFLD with hepatic necroinflammatory changes in mice fed trans fats and a high-fructose corn syrup equivalent.
Rats were fed an HCD starting at an age of 46–50 days until an age of 79–82 days. To additionally test for a difference in the age of onset and rate of liver damage progression on the 2 diets (HCD vs ND), a subset of animals was analyzed in parallel at an age of 67, 73, and 75 days (
Table 2). Daily consumption values for rats were estimated from the literature to be approximately 20 g chow and 30 mL water, respectively.
48Weiss J. Haus- und versuchstierpflege: 80 Tabellen: Enke, Stuttgart, Germany 2003.
In subsequent control measurements in
Atp7b+/- rats, we determined an average uptake of 16.1 ± 1.7 g ND food and 31 ± 3 mL water per day (ie, approximately 230 μg copper/day), and 12.5 ± 1.7 g HCD food and 50 ± 15 mL fructose syrup (ie, approximately 272 μg copper/day). Thus, the HCD/sugar-water diet supplied slightly more copper (approximately 18%) compared with the ND/tap water diet, but nevertheless resulted in almost equal liver homogenate copper contents in both
Atp7b+/- rats and
Atp7b-/- rats (
Figure 3C). MB treatment of HCD-fed
Atp7b-/- rats was performed once daily for 5 consecutive days starting at an age of 74–75 days, as recently described (150 mg/kg body weight intraperitoneally).
5- Lichtmannegger J.
- Leitzinger C.
- Wimmer R.
- Schmitt S.
- Schulz S.
- Kabiri Y.
- Eberhagen C.
- Rieder T.
- Janik D.
- Neff F.
- Straub B.K.
- Schirmacher P.
- DiSpirito A.A.
- Bandow N.
- Baral B.S.
- Flatley A.
- Kremmer E.
- Denk G.
- Reiter F.P.
- Hohenester S.
- Eckardt-Schupp F.
- Dencher N.A.
- Adamski J.
- Sauer V.
- Niemietz C.
- Schmidt H.H.
- Merle U.
- Gotthardt D.N.
- Kroemer G.
- Weiss K.H.
- Zischka H.
Methanobactin reverses acute liver failure in a rat model of Wilson disease.
Chemicals
Chemicals were mostly obtained from Sigma–Aldrich (Taufkirchen, Germany). Nitric acid, K2HPO4, KCl, malate, iodacetamide, multi-element standard IV, copper (II) sulfate pentahydrate, ethanol, and xylene were purchased from Merck (Darmstadt, Germany). Acetyl-CoA, reduced nicotinamide adenine dinucleotide (NADH), phosphoenolpyruvate, pyruvate kinase and lactate dehydrogenase were obtained from Roche Diagnostics (Mannheim, Germany). Bovine serum albumin (BSA) and 4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid (HEPES) were purchased from Carl-Roth (Karlsruhe, Germany). Tris-(hydroxymethyl)aminomethane (TRIS) was obtained from VWR International GmbH (Ismaning, Germany). Gelatin was purchased from Grüssing (Filsum, Germany). Rhodium Inductively Coupled Plasma (ICP) standard solution was purchased from SCP Science (Baie D’Urfé, Canada). Osmium tetroxide and uranyl-less contrasting agent were obtained from Science Services GmbH (Munich, Germany). Propylene oxide and epoxy resin were purchased from SERVA Electrophoresis GmbH (Heidelberg, Germany). Lead citrate was purchased from Leica Biosystems (Wetzlar, Germany).
Liver Examination
Serum AST and bilirubin levels were measured with the Reflotron system (Roche Diagnostics, Penzberg, Germany) and liver damage in animals was considered clinically apparent if the serum AST level was greater than 200 U/L and/or the bilirubin level was greater than 0.5 mg/dL.
5- Lichtmannegger J.
- Leitzinger C.
- Wimmer R.
- Schmitt S.
- Schulz S.
- Kabiri Y.
- Eberhagen C.
- Rieder T.
- Janik D.
- Neff F.
- Straub B.K.
- Schirmacher P.
- DiSpirito A.A.
- Bandow N.
- Baral B.S.
- Flatley A.
- Kremmer E.
- Denk G.
- Reiter F.P.
- Hohenester S.
- Eckardt-Schupp F.
- Dencher N.A.
- Adamski J.
- Sauer V.
- Niemietz C.
- Schmidt H.H.
- Merle U.
- Gotthardt D.N.
- Kroemer G.
- Weiss K.H.
- Zischka H.
Methanobactin reverses acute liver failure in a rat model of Wilson disease.
Serum cholesterol nonesterified fatty acids and serum triglycerides were analyzed with Respons910 (Diasys Greiner GmbH, Flacht, Germany) according to the manufacturer's guidelines. Serum ceruloplasmin activity was measured as described elsewhere.
49- Schosinsky K.H.
- Lehmann H.P.
- Beeler M.F.
Measurement of ceruloplasmin from its oxidase activity in serum by use of o-dianisidine dihydrochloride.
, 50Automated measurement of serum ferroxidase activity.
Total serum bile salt concentrations were quantified in serum samples using the Diazyme total bile salt kit (Diazyme Laboratrories, Poway, CA) according to the manufacturer’s instructions. Histologic evaluation was performed on formalin-fixed, paraffin-embedded H&E-stained liver samples. Morphologic features were summarized as an activity score as recommended for the diagnosis of steatohepatitis in NAFLD (NAS)
25- Kleiner D.E.
- Brunt E.M.
- Van Natta M.
- Behling C.
- Contos M.J.
- Cummings O.W.
- Ferrell L.D.
- Liu Y.C.
- Torbenson M.S.
- Unalp-Arida A.
- Yeh M.
- McCullough A.J.
- Sanyal A.J.
Nonalcoholic Steatohepatitis Clinical Research Network
Design and validation of a histological scoring system for nonalcoholic fatty liver disease.
as well as for hepatitis (HAI score).
51- Ishak K.
- Baptista A.
- Bianchi L.
- Callea F.
- De Groote J.
- Gudat F.
- Denk H.
- Desmet V.
- Korb G.
- MacSween R.N.
- et al.
Histological grading and staging of chronic hepatitis.
For quantification of liver triglycerides, 100 mg/mL liver tissue was sonicated within 5% NP40 solution, heated for 5 minutes at 96°C, and cooled on ice. Homogenates were cleared for 2 minutes at 20,000×
g, and supernatants (diluted in 5% NP40 solution 1:1–1:10 as required) were analyzed with Respons910 (Diasys Greiner GmbH).
13- Einer C.
- Hohenester S.
- Wimmer R.
- Wottke L.
- Artmann R.
- Schulz S.
- Gosmann C.
- Simmons A.
- Leitzinger C.
- Eberhagen C.
- Borchard S.
- Schmitt S.
- Hauck S.M.
- von Toerne C.
- Jastroch M.
- Walheim E.
- Rust C.
- Gerbes A.L.
- Popper B.
- Mayr D.
- Schnurr M.
- Vollmar A.M.
- Denk G.
- Zischka H.
Mitochondrial adaptation in steatotic mice.
Metal Content Determination
Copper in serum, liver homogenate, cytosol, and mitochondria, as well as kidney homogenate, were analyzed by ICP Optical Emission Spectrometry (Ciros Vision, SPECTRO Analytical Instruments GmbH, Kleve, Germany) after wet ashing of samples with 65% nitric acid.
4- Zischka H.
- Lichtmannegger J.
- Schmitt S.
- Jagemann N.
- Schulz S.
- Wartini D.
- Jennen L.
- Rust C.
- Larochette N.
- Galluzzi L.
- Chajes V.
- Bandow N.
- Gilles V.S.
- DiSpirito A.A.
- Esposito I.
- Goettlicher M.
- Summer K.H.
- Kroemer G.
Liver mitochondrial membrane crosslinking and destruction in a rat model of Wilson disease.
Preparation of Rat Liver Cytosol and Mitochondria
Freshly removed liver tissue was homogenized with a Teflon-glass homogenizer (B. Braun Biotech, Melsungen, Germany) in isolation buffer (pH 7.2) containing 300 mmol/L sucrose, 5 mmol/L 2-[(2-hydroxy-1,1-bis(hydroxymethyl)ethyl)amino]ethanesulfonic acid (TES), 0.2 mmol/L ethylene glycol-bis(β-aminoethyl ether)-N,N,N′,N′-tetraacetic acid (EGTA), and 0.1% BSA. Approximately 1 mL of the homogenate was centrifuged at 100,000×g (1 h, 4°C), and the supernatant (liver cytosol) was collected and stored at -80°C.
For mitochondrial isolation, the remaining homogenate was cleared from debris and nuclei by an 800×
g (10 min at 4°C) centrifugation step, and a crude mitochondrial fraction was pelleted at 18,900×
g (20 min at 4°C). To purify mitochondria, the pellet was suspended in isolation buffer, loaded on a Nycodenz gradient (Axis-Shield PoC, Oslo, Norway; gradient composition was as follows: 1 mL of 40%, 1 mL of 33%, 3 mL of 28%, 2 mL of 27%, 2 mL of 24% Nycodenz solution; diluted in 10 mmol/L TRIS, pH 7.4), and centrifuged at 74,100×
g (1 h, 4°C). The mitochondrial fraction (layer at the 28% gradient phase) was collected and suspended in isolation buffer without BSA and washed 2 times at 18,900×
g (10 min at 4°C).
52- Zischka H.
- Larochette N.
- Hoffmann F.
- Hamoller D.
- Jagemann N.
- Lichtmannegger J.
- Jennen L.
- Muller-Hocker J.
- Roggel F.
- Gottlicher M.
- Vollmar A.M.
- Kroemer G.
Electrophoretic analysis of the mitochondrial outer membrane rupture induced by permeability transition.
, 53- Schmitt S.
- Saathoff F.
- Meissner L.
- Schropp E.M.
- Lichtmannegger J.
- Schulz S.
- Eberhagen C.
- Borchard S.
- Aichler M.
- Adamski J.
- Plesnila N.
- Rothenfusser S.
- Kroemer G.
- Zischka H.
A semi-automated method for isolating functionally intact mitochondria from cultured cells and tissue biopsies.
, 54- Schulz S.
- Lichtmannegger J.
- Schmitt S.
- Leitzinger C.
- Eberhagen C.
- Einer C.
- Kerth J.
- Aichler M.
- Zischka H.
A protocol for the parallel isolation of intact mitochondria from rat liver, kidney, heart, and brain.
Mitochondrial ATP Production
ATP production was determined using the ATP Bioluminescence Assay Kit (Roche Diagnostics, Mannheim, Germany) according to the manufacturer's guideline. In detail, 10 μg mitochondria were incubated with 160 μmol/L adenosine diphosphate (ADP) and 5 mmol/L succinate for 30 minutes at room temperature in a buffer containing 0.2 mol/L sucrose, 10 mmol/L 3-(N-morpholino)propanesulfonic acid-TRIS, 1 mmol/L inorganic phosphate, 10 μmol/L EGTA and 2 μmol/L rotenone. As background control, potassium cyanide (2 mmol/L, respiratory chain complex IV inhibitor) was added. Mitochondrial ATP production was calculated in pmol/min/mg protein based on background-corrected luminescence signals and ATP standard curves (Roche Diagnostics, Mannheim, Germany).
Mitochondrial Respiration
Mitochondrial respiration was measured with an Oxygraph-2k instrument and processed via DatLab 6.2 software (Oroboros Instruments, Innsbruck, Austria). Per each chamber, 100 μg mitochondria was supplied in a buffer containing 0.25 mol/L sucrose, 1 mmol/L EGTA, 30 mmol/L K2HPO4, 15 mmol/L KCl, 5 mmol/L MgCl2, 25 mmol/L succinate, 1 μmol/L rotenone, and 0.5 mmol/L ADP, and oxygen consumption rates were measured as succinate-linked phosphorylation. To determine leak respiration, 2.5 mmol/L oligomycin was added (final, 2.5 μmol/L) to block ATP synthase. Subsequently, the protonophore carbonyl cyanide-4-(trifluoromethoxy)phenylhydrazone was titrated (2 μL steps from a 20 μmol/L stock solution) to induce maximum oxygen consumption (electron transfer system capacity). The respiratory control ratio was calculated by dividing the succinate-linked phosphorylation oxygen consumption by the oxygen consumption upon oligomycin addition.
Mitochondrial H2O2 Production
Mitochondrial H
2O
2 production was analyzed after resorufin fluorescence
55- Muller F.L.
- Liu Y.
- Abdul-Ghani M.A.
- Lustgarten M.S.
- Bhattacharya A.
- Jang Y.C.
- Van Remmen H.
High rates of superoxide production in skeletal-muscle mitochondria respiring on both complex I- and complex II-linked substrates.
(converted from Amplex Red; Molecular Probes, Invitrogen, Karlsruhe, Germany) at λ
Ex. 540/20 nm and λ
Em. 620/40 nm. The assay was performed with 75 μg mitochondria in 150 μL buffer (pH 7.4) containing 125 mmol/L KCl, 10 mmol/L 4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid, 5 mmol/L MgCl
2, 2 mmol/L K
2HPO
4, 5 μmol/L MnCl
2, and as substrates either 10 mmol/L succinate/2 μmol/L rotenone and 3.2 mmol/L ADP, or 5 mmol/L glutamate/5 mmol/L malate. To start the reaction, 50 μL of a solution containing 320 μmol/L Amplex Red, 2 U/mL horseradish peroxidase, and 60 U/mL superoxide dismutase was added. Resorufin fluorescence was followed up in a plate reader (Synergy 2; BioTek Instruments, Inc, Bad Friedrichshall, Germany) and the Resorufin slope was converted into the rate of H
2O
2 production in pmol/min/mg with a H
2O
2 standard curve.
55- Muller F.L.
- Liu Y.
- Abdul-Ghani M.A.
- Lustgarten M.S.
- Bhattacharya A.
- Jang Y.C.
- Van Remmen H.
High rates of superoxide production in skeletal-muscle mitochondria respiring on both complex I- and complex II-linked substrates.
F1FO-Activity and Citrate Synthase Activity
F
1F
O activity was assessed as described before.
13- Einer C.
- Hohenester S.
- Wimmer R.
- Wottke L.
- Artmann R.
- Schulz S.
- Gosmann C.
- Simmons A.
- Leitzinger C.
- Eberhagen C.
- Borchard S.
- Schmitt S.
- Hauck S.M.
- von Toerne C.
- Jastroch M.
- Walheim E.
- Rust C.
- Gerbes A.L.
- Popper B.
- Mayr D.
- Schnurr M.
- Vollmar A.M.
- Denk G.
- Zischka H.
Mitochondrial adaptation in steatotic mice.
, 56- Schmitt S.
- Schulz S.
- Schropp E.M.
- Eberhagen C.
- Simmons A.
- Beisker W.
- Aichler M.
- Zischka H.
Why to compare absolute numbers of mitochondria.
In detail, 20 μg mitochondria were incubated in buffer containing either 50 mmol/L TRIS (pH 8.0) or an additional 3 μmol/L oligomycin (F
1Fo inhibitor, negative control) for 5 minutes at 37°C in a plate reader (Synergy 2). To start the reaction, a final mixture of 0.5 mmol/L ATP, 3 μmol/L carbonyl cyanide 3-chlorophenylhydrazone, 1 mg/mL BSA, 1 μmol/L antimycin A, 10 mmol/L KCl, 4 mmol/L MgCl
2, 0.2 mmol/L NADH, 2 mmol/L phosphoenolpyruvate, 4 U lactate dehydrogenase, and pyruvate kinase were added. The F
1F
O activity was determined in the reverse direction after ATP hydrolysis and NADH oxidation in parallel to the conversion of pyruvate to lactate. The decrease in NADH absorbance at 340 nm was proportional to the ATPase activity and was calculated in nmol/min/mg protein. The F
1F
O activity was normalized to the activity of the housekeeping enzyme citrate synthase (CS). The activity of mitochondrial CS was determined according to earlier reports.
57- Saggerson E.D.
- Carpenter C.A.
Carnitine palmitoyltransferase in liver and five extrahepatic tissues in the rat. Inhibition by DL-2-bromopalmitoyl-CoA and effect of hypothyroidism.
, 58- Williams A.J.
- Coakley J.
- Christodoulou J.
Automated analysis of mitochondrial enzymes in cultured skin fibroblasts.
In brief, 280 μL of a solution containing 2.5% (wt/vol) Triton X-100, 100 μmol/L 5,5’-dithiobis-(2-nitrobenzoic acid), 75 μg acetyl-CoA, and 500 μmol/L oxaloacetate was incubated at 37°C. The reaction was started by adding 20 μg mitochondria and followed at 412 nm for 5 minutes. CS activities were calculated from the linear slopes of the initial rates.
56- Schmitt S.
- Schulz S.
- Schropp E.M.
- Eberhagen C.
- Simmons A.
- Beisker W.
- Aichler M.
- Zischka H.
Why to compare absolute numbers of mitochondria.
Electron Microscopy
Animal livers and isolated mitochondria were fixed with 2.5% glutaraldehyde (Science Services GmbH), postfixed with 1% osmium tetroxide, dehydrated with ethanol and propylene oxide, and were embedded in epoxy resin. Sixty-nanometer sections were cut using the Leica EM UC7 microtome (Leica Biosystems) or the Reichert-Jung Ultracut E microtome (now Leica Biosystems). Ultrathin sections were negative-stained with uranyl acetate (Uranyless) and lead citrate. Images were acquired using either a FEI Tecnai-12 electron microscope equipped with a VELETTA CCD digital camera (FEI, Eindhoven, The Netherlands) or using a Jeol 1200 EXII electron microscope (Akishima, Tokyo, Japan) equipped with a KeenViewII digital camera (Olympus, Hamburg, Germany) and processed with the iTEM software package (anlySISFive; Olympus).
For structural analyses, mitochondria were grouped in normally structured mitochondria of the “condensed type”
59Ultrastructural bases for metabolically linked mechanical activity in mitochondria. II. Electron transport-linked ultrastructural transformations in mitochondria.
or in altered mitochondria with marked membrane detachments, matrix condensations, and ballooned cristae. A total of 350–750 mitochondria were included per group of animals.
Proteome Analysis
Mass spectrometry (MS) sample preparation
Liver homogenates were lysed in urea buffer (9 mol/L urea, 6 mol/L thiourea, 65 mmol/L dithiothreitol). A total of 10 μg protein per replicate was proteolytically cleaved by applying a modified filter-aided sample preparation procedure,
14- Einer C.
- Hohenester S.
- Wimmer R.
- Wottke L.
- Artmann R.
- Schulz S.
- Gosmann C.
- Simmons A.
- Leitzinger C.
- Eberhagen C.
- Borchard S.
- Schmitt S.
- Hauck S.M.
- von Toerne C.
- Jastroch M.
- Walheim E.
- Rust C.
- Gerbes A.L.
- Popper B.
- Mayr D.
- Schnurr M.
- Vollmar A.M.
- Denk G.
- Zischka H.
Data on chow, liver tissue and mitochondrial fatty acid compositions as well as mitochondrial proteome changes after feeding mice a western diet for 6-24 weeks.
including a quenching step using 1 mol/L dithiothreitol to bind unreacted iodacetamide. After elution of peptides, samples were acidified with 0.5% trifluoroacetic acid and analyzed on the OrbitrapXL (Thermo Fisher Scientific, Dreieich, Germany) as described.
14- Einer C.
- Hohenester S.
- Wimmer R.
- Wottke L.
- Artmann R.
- Schulz S.
- Gosmann C.
- Simmons A.
- Leitzinger C.
- Eberhagen C.
- Borchard S.
- Schmitt S.
- Hauck S.M.
- von Toerne C.
- Jastroch M.
- Walheim E.
- Rust C.
- Gerbes A.L.
- Popper B.
- Mayr D.
- Schnurr M.
- Vollmar A.M.
- Denk G.
- Zischka H.
Data on chow, liver tissue and mitochondrial fatty acid compositions as well as mitochondrial proteome changes after feeding mice a western diet for 6-24 weeks.
, 60- von Toerne C.
- Kahle M.
- Schafer A.
- Ispiryan R.
- Blindert M.
- Hrabe De Angelis M.
- Neschen S.
- Ueffing M.
- Hauck S.M.
Apoe, Mbl2, and Psp plasma protein levels correlate with diabetic phenotype in NZO mice--an optimized rapid workflow for SRM-based quantification.
Mass spectrometry
Liquid chromatography tandem-mass spectrometry analysis was performed on a LTQ-Orbitrap XL operated on a nano-high-performance liquid chromatography (UltiMate 3000 RSLCnano System; Thermo Fisher Scientific) as described elsewhere,
14- Einer C.
- Hohenester S.
- Wimmer R.
- Wottke L.
- Artmann R.
- Schulz S.
- Gosmann C.
- Simmons A.
- Leitzinger C.
- Eberhagen C.
- Borchard S.
- Schmitt S.
- Hauck S.M.
- von Toerne C.
- Jastroch M.
- Walheim E.
- Rust C.
- Gerbes A.L.
- Popper B.
- Mayr D.
- Schnurr M.
- Vollmar A.M.
- Denk G.
- Zischka H.
Data on chow, liver tissue and mitochondrial fatty acid compositions as well as mitochondrial proteome changes after feeding mice a western diet for 6-24 weeks.
, 61- Obermann J.
- Priglinger C.S.
- Merl-Pham J.
- Geerlof A.
- Priglinger S.
- Gotz M.
- Hauck S.M.
Proteome-wide identification of glycosylation-dependent interactors of galectin-1 and galectin-3 on mesenchymal retinal pigment epithelial (RPE) cells.
with the modification of using a nonlinear 300-minute liquid chromatography gradient.
Protein identification and label-free relative quantification
Acquired spectra were analyzed using Progenesis QI for proteomics (v2.0; Nonlinear Dynamics, Newcastle upon Tyne, UK), as described previously,
14- Einer C.
- Hohenester S.
- Wimmer R.
- Wottke L.
- Artmann R.
- Schulz S.
- Gosmann C.
- Simmons A.
- Leitzinger C.
- Eberhagen C.
- Borchard S.
- Schmitt S.
- Hauck S.M.
- von Toerne C.
- Jastroch M.
- Walheim E.
- Rust C.
- Gerbes A.L.
- Popper B.
- Mayr D.
- Schnurr M.
- Vollmar A.M.
- Denk G.
- Zischka H.
Data on chow, liver tissue and mitochondrial fatty acid compositions as well as mitochondrial proteome changes after feeding mice a western diet for 6-24 weeks.
with the following adaptations: spectra were searched using the search engine Mascot (version 2.5.1; Matrix Science, London, UK) against the Ensembl rat database (release 80; 28,609 sequences). The Mascot-integrated decoy database search using the Percolator algorithm was set to a peptide false discovery rate of less than 1.5%. Peptide assignments were imported into Progenesis QI. Normalized abundances of peptides were summed up and allocated to the respective protein.
Laser Ablation ICP-Mass Spectrometry
For laser ablation ICP-MS analysis, tissue sections of rat liver samples embedded in paraffin were prepared with a thickness of 5 μm using a microtome HM 355S (Thermo Scientific, Bremen, Germany). To quantify the copper concentration in the tissue samples, matrix-matched standards based on 10% gelatin in aqueous solutions of copper (II) sulfate pentahydrate were prepared as described before.
62- Hachmoller O.
- Aichler M.
- Schwamborn K.
- Lutz L.
- Werner M.
- Sperling M.
- Walch A.
- Karst U.
Element bioimaging of liver needle biopsy specimens from patients with Wilson's disease by laser ablation-inductively coupled plasma-mass spectrometry.
The concentration range for copper was between 10 and 1000 μg/g. To validate the standard concentrations, bulk analysis after digestion with nitric acid was used as described before.
62- Hachmoller O.
- Aichler M.
- Schwamborn K.
- Lutz L.
- Werner M.
- Sperling M.
- Walch A.
- Karst U.
Element bioimaging of liver needle biopsy specimens from patients with Wilson's disease by laser ablation-inductively coupled plasma-mass spectrometry.
A laser ablation system (LSX-213 G2+; Teledyne CETAC Technologies, Omaha, NE) was used. ICP-MS detection was performed with a quadrupole-based iCAP TQ (Thermo Fisher Scientific). The laser ablation and ICP-MS were connected with Tygon tubing Saint-Gobain (Courbevoie, France). The following ICP-MS parameters were applied for all measurements: forward power, 1550 W; cool gas flow, 14 L/min; and auxiliary gas flow, 0.8 L/min. In-house–developed software was used to convert the laser ablation ICP-MS data into 2-dimensional images. The copper concentration was calculated using a linear calibration function derived from the average signal intensities for each standard using Microsoft Excel 2016 (Microsoft Corp, Redmond, WA).
Miscellaneous
MB was isolated from the spent media of
Methylosinus trichosporium OB3b as previously described.
63- Bandow N.L.
- Gallagher W.H.
- Behling L.
- Choi D.W.
- Semrau J.D.
- Hartsel S.C.
- Gilles V.S.
- Dispirito A.A.
Isolation of methanobactin from the spent media of methane-oxidizing bacteria.
Protein quantification was performed by the Bradford
64A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding.
or Biuret assay (T1949; Sigma-Aldrich).
Statistics
Throughout this study, N refers to the number of analyzed animals. Data are presented as means ± SD. Statistical significance was analyzed using 1-way analysis of variance with the Tukey multiple comparisons test, or the nonparametric Kruskal–Wallis test when comparing 3 or more sample sets (GraphPad Prism 7, GraphPad Software, Inc, San Diego, CA). For 2 group comparisons, the unpaired 2-tailed Student t test was used for parametric data and the Mann–Whitney test was used for nonparametric data, respectively (GraphPad Prism 7).
All authors had access to the study data and reviewed and approved the final manuscript.
Article info
Publication history
Published online: December 23, 2018
Accepted:
December 13,
2018
Received:
April 12,
2018
Footnotes
Author contributions Claudia Einer and Christin Leitzinger performed experiments, analyzed data, and wrote the paper; Josef Lichtmannegger, Tamara Rieder, Sabine Borchard, Ralf Wimmer, and Andreas E. Kremer performed experiments; Frauke Neff, Bastian Popper, Carola Eberhagen, Elena V. Polishchuk, and Roman S. Polishchuk performed histochemical and transmission electron microscope analyses; Christine von Toerne and Stefanie M. Hauck performed the proteome analysis; Uwe Karst and Jennifer-Christin Müller performed laser ablation inductively coupled plasma-mass spectrometry; Alan A. DiSpirito, Bipin S. Baral, and Jeremy Semrau produced the methanobactin samples; Gerald Denk reviewed the data and the manuscript; Karl Heinz Weiss analyzed the data and designed experiments; Simon Hohenester analyzed the data, designed experiments, guided data compilation, and wrote the paper; and Hans Zischka designed experiments, analyzed the data, wrote the paper, and directed this study.
Conflicts of interest The authors disclose no conflicts.
Funding This study was supported in part by Deutsche Forschungsgemeinschaft grants ZI1386/2-1 (H.Z.) and HO4460/3-1 (S.H.), and by Verein zur Förderung von Wissenschaft und Forschung at the Faculty of Medicine, LMU Munich, grant 7/16 (S.H.).
Copyright
© 2019 The Authors. Published by Elsevier Inc. on behalf of the AGA Institute.